HL_8P85_197

3D structure

PDB id

8P85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Fluorolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGGCCCAUUCGGGUCU

Length

16 nucleotides

Bulged bases

8P85|1|sR|C|489, 8P85|1|sR|A|492, 8P85|1|sR|U|493, 8P85|1|sR|U|494, 8P85|1|sR|C|495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P85|1|sR|G|486
8P85|1|sR|G|487
8P85|1|sR|G|488
8P85|1|sR|C|489
8P85|1|sR|C|490
8P85|1|sR|C|491
8P85|1|sR|A|492
8P85|1|sR|U|493
8P85|1|sR|U|494
8P85|1|sR|C|495
8P85|1|sR|G|496
8P85|1|sR|G|497
8P85|1|sR|G|498
8P85|1|sR|U|499
8P85|1|sR|C|500
8P85|1|sR|U|501

Current chains

Chain sR

16S ribosomal RNA

Nearby chains

Chain e0

40S ribosomal protein S30-A

Chain s9

40S ribosomal protein S9-A