HL_8P8N_027

3D structure

PDB id

8P8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPL39 integrated into the yeast 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

UCUAGACAGGAA

Length

12 nucleotides

Bulged bases

8P8N|1|A|U|1220, 8P8N|1|A|A|1221

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P8N|1|A|U|1218
8P8N|1|A|C|1219
8P8N|1|A|U|1220
8P8N|1|A|A|1221
8P8N|1|A|G|1222
8P8N|1|A|A|1223
8P8N|1|A|C|1224
8P8N|1|A|A|1225
8P8N|1|A|G|1226
8P8N|1|A|G|1285
8P8N|1|A|A|1286
8P8N|1|A|A|1287

Current chains

Chain A

25S rRNA

Nearby chains

Chain QS

60S ribosomal protein L20-A

Chain RO

Ubiquitin-60S ribosomal protein L40