HL_8PEG_111
3D structure
- PDB id
- 8PEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CCCU(CM0)AC(6MZ)AGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: CM0, 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PEG_111 not in the Motif Atlas
- Homologous match to HL_4WZD_209
- Geometric discrepancy: 0.2653
- The information below is about HL_4WZD_209
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PEG|1|Y|C|30
8PEG|1|Y|C|31
8PEG|1|Y|C|32
8PEG|1|Y|U|33
8PEG|1|Y|CM0|34
8PEG|1|Y|A|35
8PEG|1|Y|C|36
8PEG|1|Y|6MZ|37
8PEG|1|Y|A|38
8PEG|1|Y|G|39
8PEG|1|Y|G|40
Current chains
- Chain Y
- tRNA-Val (A-site)
Nearby chains
- Chain 7
- Large subunit ribosomal RNA; LSU rRNA
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- Small ribosomal subunit protein uS12
- Chain V
- mRNA
Coloring options: