HL_8PFR_016
3D structure
- PDB id
- 8PFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPL39L integrated into the yeast 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PFR_016 not in the Motif Atlas
- Homologous match to HL_8C3A_016
- Geometric discrepancy: 0.0632
- The information below is about HL_8C3A_016
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8PFR|1|A|U|707
8PFR|1|A|G|708
8PFR|1|A|A|709
8PFR|1|A|A|710
8PFR|1|A|A|711
8PFR|1|A|G|712
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain JT
- 60S ribosomal protein L13-A
- Chain QP
- 60S ribosomal protein L18-A
- Chain RA
- 60S ribosomal protein L28
- Chain RI
- 60S ribosomal protein L36-A
Coloring options: