HL_8PFR_027

3D structure

PDB id

8PFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPL39L integrated into the yeast 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

UCUAGACAGGAA

Length

12 nucleotides

Bulged bases

8PFR|1|A|U|1220, 8PFR|1|A|A|1221

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PFR|1|A|U|1218
8PFR|1|A|C|1219
8PFR|1|A|U|1220
8PFR|1|A|A|1221
8PFR|1|A|G|1222
8PFR|1|A|A|1223
8PFR|1|A|C|1224
8PFR|1|A|A|1225
8PFR|1|A|G|1226
8PFR|1|A|G|1285
8PFR|1|A|A|1286
8PFR|1|A|A|1287

Current chains

Chain A

25S rRNA

Nearby chains

Chain QS

60S ribosomal protein L20-A

Chain RO

Ubiquitin-60S ribosomal protein L40