HL_8PHJ_062
3D structure
- PDB id
- 8PHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cA4-bound Cami1 in complex with 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PHJ_062 not in the Motif Atlas
- Homologous match to HL_7RQB_026
- Geometric discrepancy: 0.5445
- The information below is about HL_7RQB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56241.1
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 15
Unit IDs
8PHJ|1|a|C|885
8PHJ|1|a|A|886
8PHJ|1|a|U|887
8PHJ|1|a|C|888
8PHJ|1|a|C|889
8PHJ|1|a|C|890
8PHJ|1|a|G|891
Current chains
- Chain a
- 23S rRNA (2862-MER)
Nearby chains
- Chain M
- Small ribosomal subunit protein uS13
- Chain Y
- CRISPR-associated protein, APE2256 family
Coloring options: