HL_8PHJ_079
3D structure
- PDB id
- 8PHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cA4-bound Cami1 in complex with 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- CCUCGCG
- Length
- 7 nucleotides
- Bulged bases
- 8PHJ|1|a|U|1729, 8PHJ|1|a|C|1732
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PHJ_079 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2479
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
8PHJ|1|a|C|1727
8PHJ|1|a|C|1728
8PHJ|1|a|U|1729
8PHJ|1|a|C|1730
8PHJ|1|a|G|1731
8PHJ|1|a|C|1732
8PHJ|1|a|G|1733
Current chains
- Chain a
- 23S rRNA (2862-MER)
Nearby chains
No other chains within 10ÅColoring options: