HL_8PJ2_018

3D structure

PDB id

8PJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

8PJ2|1|A|G|836, 8PJ2|1|A|C|840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ2|1|A|C|833
8PJ2|1|A|C|834
8PJ2|1|A|C|835
8PJ2|1|A|G|836
8PJ2|1|A|A|837
8PJ2|1|A|G|838
8PJ2|1|A|C|839
8PJ2|1|A|C|840
8PJ2|1|A|G|841

Current chains

Chain A

18S rRNA

Nearby chains

Chain 1

Eukaryotic translation initiation factor 3 subunit B

Chain C

40S ribosomal protein S4, X isoform

Chain T

40S ribosomal protein S24