HL_8PJ2_019

3D structure

PDB id

8PJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

8PJ2|1|A|G|891, 8PJ2|1|A|U|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ2|1|A|U|885
8PJ2|1|A|A|886
8PJ2|1|A|U|887
8PJ2|1|A|U|888
8PJ2|1|A|U|889
8PJ2|1|A|U|890
8PJ2|1|A|G|891
8PJ2|1|A|U|892
8PJ2|1|A|U|893
8PJ2|1|A|G|894
8PJ2|1|A|G|895
8PJ2|1|A|U|896
8PJ2|1|A|U|897
8PJ2|1|A|U|898
8PJ2|1|A|U|899
8PJ2|1|A|C|900
8PJ2|1|A|G|901

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6