HL_8PJ3_016

3D structure

PDB id

8PJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UCUCGGCGGCCCGAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ3|1|A|U|747
8PJ3|1|A|C|748
8PJ3|1|A|U|749
8PJ3|1|A|C|750
8PJ3|1|A|G|751
8PJ3|1|A|G|752
8PJ3|1|A|C|753
8PJ3|1|A|G|788
8PJ3|1|A|G|789
8PJ3|1|A|C|790
8PJ3|1|A|C|791
8PJ3|1|A|C|792
8PJ3|1|A|G|793
8PJ3|1|A|A|794
8PJ3|1|A|A|795

Current chains

Chain A

18S rRNA

Nearby chains

Chain B

40S ribosomal protein S11

Chain C

40S ribosomal protein S4, X isoform

Chain G

40S ribosomal protein S7

Chain S

40S ribosomal protein S6