HL_8PJ3_018

3D structure

PDB id

8PJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

8PJ3|1|A|G|836, 8PJ3|1|A|C|840

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ3|1|A|C|833
8PJ3|1|A|C|834
8PJ3|1|A|C|835
8PJ3|1|A|G|836
8PJ3|1|A|A|837
8PJ3|1|A|G|838
8PJ3|1|A|C|839
8PJ3|1|A|C|840
8PJ3|1|A|G|841

Current chains

Chain A

18S rRNA

Nearby chains

Chain C

40S ribosomal protein S4, X isoform

Chain D

40S ribosomal protein S9

Chain T

40S ribosomal protein S24