HL_8PJ6_035

3D structure

PDB id

8PJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex with initiator tRNA, eIF1A and eIF3 (off-pathway)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCCGCCGGGGGCCCUGGCGGAGCG

Length

24 nucleotides

Bulged bases

8PJ6|1|A|C|1783

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ6|1|A|C|1751
8PJ6|1|A|C|1752
8PJ6|1|A|C|1753
8PJ6|1|A|G|1754
8PJ6|1|A|C|1755
8PJ6|1|A|C|1756
8PJ6|1|A|G|1757
8PJ6|1|A|G|1758
8PJ6|1|A|G|1759
8PJ6|1|A|G|1760
8PJ6|1|A|G|1771
8PJ6|1|A|C|1772
8PJ6|1|A|C|1773
8PJ6|1|A|C|1774
8PJ6|1|A|U|1775
8PJ6|1|A|G|1776
8PJ6|1|A|G|1777
8PJ6|1|A|C|1778
8PJ6|1|A|G|1779
8PJ6|1|A|G|1780
8PJ6|1|A|A|1781
8PJ6|1|A|G|1782
8PJ6|1|A|C|1783
8PJ6|1|A|G|1784

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6