HL_8PJ6_040
3D structure
- PDB id
- 8PJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human 48S translation initiation complex with initiator tRNA, eIF1A and eIF3 (off-pathway)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUCUAUUUUGUUGGUUUUCGGAAC
- Length
- 25 nucleotides
- Bulged bases
- 8PJ6|1|A|U|887, 8PJ6|1|A|G|891, 8PJ6|1|A|U|896
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PJ6|1|A|G|881
8PJ6|1|A|U|882
8PJ6|1|A|U|883
8PJ6|1|A|C|884
8PJ6|1|A|U|885
8PJ6|1|A|A|886
8PJ6|1|A|U|887
8PJ6|1|A|U|888
8PJ6|1|A|U|889
8PJ6|1|A|U|890
8PJ6|1|A|G|891
8PJ6|1|A|U|892
8PJ6|1|A|U|893
8PJ6|1|A|G|894
8PJ6|1|A|G|895
8PJ6|1|A|U|896
8PJ6|1|A|U|897
8PJ6|1|A|U|898
8PJ6|1|A|U|899
8PJ6|1|A|C|900
8PJ6|1|A|G|901
8PJ6|1|A|G|902
8PJ6|1|A|A|903
8PJ6|1|A|A|904
8PJ6|1|A|C|905
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein S11
- Chain S
- 40S ribosomal protein S6
Coloring options: