HL_8PK0_035
3D structure
- PDB id
- 8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- AAUGAUAUCAUCUCAACU
- Length
- 18 nucleotides
- Bulged bases
- 8PK0|1|A|U|3214, 8PK0|1|A|C|3220
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PK0_035 not in the Motif Atlas
- Geometric match to HL_7A0S_074
- Geometric discrepancy: 0.2833
- The information below is about HL_7A0S_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28904.1
- Basepair signature
- cWW-F-F-tWH-cWH-tSH-tHW-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
8PK0|1|A|A|3207
8PK0|1|A|A|3208
8PK0|1|A|U|3209
8PK0|1|A|G|3210
8PK0|1|A|A|3211
8PK0|1|A|U|3212
8PK0|1|A|A|3213
8PK0|1|A|U|3214
8PK0|1|A|C|3215
8PK0|1|A|A|3216
8PK0|1|A|U|3217
8PK0|1|A|C|3218
8PK0|1|A|U|3219
8PK0|1|A|C|3220
8PK0|1|A|A|3221
8PK0|1|A|A|3222
8PK0|1|A|C|3223
8PK0|1|A|U|3224
Current chains
- Chain A
- 16S rRNA + pre-H68-71 segment
Nearby chains
- Chain K
- 39S ribosomal protein L13, mitochondrial
- Chain k
- 39S ribosomal protein L53, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: