HL_8PNN_025
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUAAGC
- Length
- 7 nucleotides
- Bulged bases
- 8PNN|1|1|G|1131
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_025 not in the Motif Atlas
- Homologous match to HL_8P9A_137
- Geometric discrepancy: 0.0576
- The information below is about HL_8P9A_137
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
8PNN|1|1|G|1126
8PNN|1|1|G|1127
8PNN|1|1|U|1128
8PNN|1|1|A|1129
8PNN|1|1|A|1130
8PNN|1|1|G|1131
8PNN|1|1|C|1132
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain r
- 60S ribosomal protein L10
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