HL_8PNN_185
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAUUUAUACAG
- Length
- 12 nucleotides
- Bulged bases
- 8PNN|1|sR|U|75, 8PNN|1|sR|U|77
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_185 not in the Motif Atlas
- Homologous match to HL_8P9A_191
- Geometric discrepancy: 0.1018
- The information below is about HL_8P9A_191
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81312.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8PNN|1|sR|C|70
8PNN|1|sR|A|71
8PNN|1|sR|A|72
8PNN|1|sR|U|73
8PNN|1|sR|U|74
8PNN|1|sR|U|75
8PNN|1|sR|A|76
8PNN|1|sR|U|77
8PNN|1|sR|A|78
8PNN|1|sR|C|79
8PNN|1|sR|A|80
8PNN|1|sR|G|81
Current chains
- Chain sR
- 16S ribosomal RNA
Nearby chains
- Chain CY
- 60S ribosomal protein L24-A
- Chain d4
- 40S ribosomal protein S24-A
- Chain s6
- 40S ribosomal protein S6-A
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