HL_8PNN_189

3D structure

PDB id

8PNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Bromolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

8PNN|1|sR|U|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8PNN_189 not in the Motif Atlas

Homologous match to HL_8P9A_196

Geometric discrepancy: 0.0509

The information below is about HL_8P9A_196

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8PNN|1|sR|C|276
8PNN|1|sR|U|277
8PNN|1|sR|U|278
8PNN|1|sR|G|279

Current chains

Chain sR

16S ribosomal RNA

Nearby chains

Chain CY

60S ribosomal protein L24-A