HL_8PNN_198

3D structure

PDB id

8PNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Bromolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUGAGUCCUUGUGGCUCUUG

Length

21 nucleotides

Bulged bases

8PNN|1|sR|U|718, 8PNN|1|sR|U|719, 8PNN|1|sR|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PNN|1|sR|C|709
8PNN|1|sR|U|710
8PNN|1|sR|U|711
8PNN|1|sR|G|712
8PNN|1|sR|A|713
8PNN|1|sR|G|714
8PNN|1|sR|U|715
8PNN|1|sR|C|716
8PNN|1|sR|C|717
8PNN|1|sR|U|718
8PNN|1|sR|U|719
8PNN|1|sR|G|720
8PNN|1|sR|U|721
8PNN|1|sR|G|722
8PNN|1|sR|G|723
8PNN|1|sR|C|724
8PNN|1|sR|U|725
8PNN|1|sR|C|726
8PNN|1|sR|U|727
8PNN|1|sR|U|728
8PNN|1|sR|G|729

Current chains

Chain sR

16S ribosomal RNA

Nearby chains