HL_8PV6_058
3D structure
- PDB id
- 8PV6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.94 Å
Loop
- Sequence
- CGUUCAUAG
- Length
- 9 nucleotides
- Bulged bases
- 8PV6|1|C1|C|2803
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PV6_058 not in the Motif Atlas
- Geometric match to HL_5J7L_151
- Geometric discrepancy: 0.1883
- The information below is about HL_5J7L_151
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80922.2
- Basepair signature
- cWW-tSH-F
- Number of instances in this motif group
- 3
Unit IDs
8PV6|1|C1|C|2799
8PV6|1|C1|G|2800
8PV6|1|C1|U|2801
8PV6|1|C1|U|2802
8PV6|1|C1|C|2803
8PV6|1|C1|A|2804
8PV6|1|C1|U|2805
8PV6|1|C1|A|2806
8PV6|1|C1|G|2807
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain C4
- 5S ribosomal RNA; 5S rRNA
- Chain CK
- Ribosome biogenesis protein NSA2 homolog
- Chain CL
- Putative GTP binding protein
- Chain Cz
- rRNA-processing protein
- Chain LS
- 60S ribosomal protein L20
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