HL_8PV7_068
3D structure
- PDB id
- 8PV7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.12 Å
Loop
- Sequence
- CUCCGG
- Length
- 6 nucleotides
- Bulged bases
- 8PV7|1|C1|C|3145
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PV7_068 not in the Motif Atlas
- Geometric match to HL_5Y85_004
- Geometric discrepancy: 0.0678
- The information below is about HL_5Y85_004
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_61337.3
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 62
Unit IDs
8PV7|1|C1|C|3143
8PV7|1|C1|U|3144
8PV7|1|C1|C|3145
8PV7|1|C1|C|3146
8PV7|1|C1|G|3147
8PV7|1|C1|G|3148
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain LH
- 60S ribosomal protein l9-like protein
- Chain LM
- 60S ribosomal protein L14-like protein
- Chain LO
- 60S ribosomal protein L16-like protein
- Chain LS
- 60S ribosomal protein L20
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