HL_8PVL_021
3D structure
- PDB id
- 8PVL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- G(A2M)CGUGCAAAUC
- Length
- 12 nucleotides
- Bulged bases
- 8PVL|1|C1|U|861, 8PVL|1|C1|A|865, 8PVL|1|C1|A|866
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PVL|1|C1|G|857
8PVL|1|C1|A2M|858
8PVL|1|C1|C|859
8PVL|1|C1|G|860
8PVL|1|C1|U|861
8PVL|1|C1|G|862
8PVL|1|C1|C|863
8PVL|1|C1|A|864
8PVL|1|C1|A|865
8PVL|1|C1|A|866
8PVL|1|C1|U|867
8PVL|1|C1|C|868
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain CH
- Nucleolar GTP-binding protein 1
- Chain LB
- 60S ribosomal protein L3-like protein
- Chain LP
- 60S ribosomal protein l17-like protein
- Chain Lj
- Ribosomal protein L37
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