3D structure

PDB id
8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of arbekacin bound Escherichia coli 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GAGUCUGCAACUCGACUC
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8Q4F|1|A|G|1310
8Q4F|1|A|A|1311
8Q4F|1|A|G|1312
8Q4F|1|A|U|1313
8Q4F|1|A|C|1314
8Q4F|1|A|U|1315
8Q4F|1|A|G|1316
8Q4F|1|A|C|1317
8Q4F|1|A|A|1318
8Q4F|1|A|A|1319
8Q4F|1|A|C|1320
8Q4F|1|A|U|1321
8Q4F|1|A|C|1322
8Q4F|1|A|G|1323
8Q4F|1|A|A|1324
8Q4F|1|A|C|1325
8Q4F|1|A|U|1326
8Q4F|1|A|C|1327

Current chains

Chain A
16S rRNA

Nearby chains

Chain 4
Large ribosomal subunit protein bL31A
Chain M
Small ribosomal subunit protein uS13
Chain N
Small ribosomal subunit protein uS14
Chain S
Small ribosomal subunit protein uS19

Coloring options:

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