HL_8Q4F_029
3D structure
- PDB id
- 8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of arbekacin bound Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 8Q4F|1|A|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q4F_029 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.415
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8Q4F|1|A|G|1356
8Q4F|1|A|A|1357
8Q4F|1|A|U|1358
8Q4F|1|A|C|1359
8Q4F|1|A|A|1360
8Q4F|1|A|G|1361
8Q4F|1|A|A|1362
8Q4F|1|A|A|1363
8Q4F|1|A|U|1364
8Q4F|1|A|G|1365
8Q4F|1|A|C|1366
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
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