3D structure

PDB id
8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of arbekacin bound Escherichia coli 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CCAAGAGUUCAUAUCGACG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8Q4F|1|a|C|2466
8Q4F|1|a|C|2467
8Q4F|1|a|A|2468
8Q4F|1|a|A|2469
8Q4F|1|a|G|2470
8Q4F|1|a|A|2471
8Q4F|1|a|G|2472
8Q4F|1|a|U|2473
8Q4F|1|a|U|2474
8Q4F|1|a|C|2475
8Q4F|1|a|A|2476
8Q4F|1|a|U|2477
8Q4F|1|a|A|2478
8Q4F|1|a|U|2479
8Q4F|1|a|C|2480
8Q4F|1|a|G|2481
8Q4F|1|a|A|2482
8Q4F|1|a|C|2483
8Q4F|1|a|G|2484

Current chains

Chain a
23S rRNA

Nearby chains

Chain 3
Large ribosomal subunit protein bL36A
Chain g
Large ribosomal subunit protein uL6
Chain l
50S ribosomal protein L16

Coloring options:

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