HL_8Q5I_068
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- GCAUACGAC
- Length
- 9 nucleotides
- Bulged bases
- 8Q5I|1|1|C|3269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q5I_068 not in the Motif Atlas
- Geometric match to HL_5TBW_070
- Geometric discrepancy: 0.0914
- The information below is about HL_5TBW_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.4
- Basepair signature
- cWW-cSW-F-F-F-cWW
- Number of instances in this motif group
- 9
Unit IDs
8Q5I|1|1|G|3268
8Q5I|1|1|C|3269
8Q5I|1|1|A|3270
8Q5I|1|1|U|3271
8Q5I|1|1|A|3272
8Q5I|1|1|C|3273
8Q5I|1|1|G|3274
8Q5I|1|1|A|3275
8Q5I|1|1|C|3276
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain k
- 60S ribosomal protein L3
- Chain x
- Ribosomal protein L22
Coloring options: