HL_8Q5I_093

3D structure

PDB id

8Q5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cephaeline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.45 Å

Loop

Sequence

UCUG

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8Q5I_093 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1181

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

8Q5I|1|A|U|1040
8Q5I|1|A|C|1041
8Q5I|1|A|U|1048
8Q5I|1|A|G|1049

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain C

40S ribosomal protein S1

Chain c

40S ribosomal protein S27