HL_8Q7N_002
3D structure
- PDB id
- 8Q7N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCCUUUUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Q7N|1|5|G|37
8Q7N|1|5|C|38
8Q7N|1|5|C|39
8Q7N|1|5|U|40
8Q7N|1|5|U|41
8Q7N|1|5|U|42
8Q7N|1|5|U|43
8Q7N|1|5|A|44
8Q7N|1|5|C|45
Current chains
- Chain 5
- U5 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain D
- Thioredoxin-like protein 4A
- Chain K
- Microfibrillar-associated protein 1
- Chain Z
- MINX pre-mRNA
Coloring options: