HL_8QBT_037

3D structure

PDB id

8QBT (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli ApdP-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCCAGACAGUCGAG

Length

14 nucleotides

Bulged bases

8QBT|1|A|A|1046

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QBT|1|A|C|1043
8QBT|1|A|C|1044
8QBT|1|A|C|1045
8QBT|1|A|A|1046
8QBT|1|A|G|1047
8QBT|1|A|A|1048
8QBT|1|A|C|1049
8QBT|1|A|A|1050
8QBT|1|A|G|1051
8QBT|1|A|U|1108
8QBT|1|A|C|1109
8QBT|1|A|G|1110
8QBT|1|A|A|1111
8QBT|1|A|G|1112

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

Large ribosomal subunit protein uL6