HL_8QBT_106
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGAUAAA
- Length
- 7 nucleotides
- Bulged bases
- 8QBT|1|i|U|1168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QBT_106 not in the Motif Atlas
- Homologous match to HL_5J7L_026
- Geometric discrepancy: 0.2373
- The information below is about HL_5J7L_026
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_93535.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8QBT|1|i|U|1165
8QBT|1|i|G|1166
8QBT|1|i|A|1167
8QBT|1|i|U|1168
8QBT|1|i|A|1169
8QBT|1|i|A|1170
8QBT|1|i|A|1171
Current chains
- Chain i
- 16S rRNA
Nearby chains
- Chain j
- 30S ribosomal protein S2
Coloring options: