HL_8QBT_117

3D structure

PDB id

8QBT (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli ApdP-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GCUUAUGC

Length

8 nucleotides

Bulged bases

8QBT|1|A|U|1173, 8QBT|1|A|U|1174, 8QBT|1|A|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QBT|1|A|G|1171
8QBT|1|A|C|1172
8QBT|1|A|U|1173
8QBT|1|A|U|1174
8QBT|1|A|A|1175
8QBT|1|A|U|1176
8QBT|1|A|G|1177
8QBT|1|A|C|1178

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15