HL_8QFD_074
3D structure
- PDB id
- 8QFD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- UFL1 E3 ligase bound 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUGAAUUGCAGGCGAUC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QFD|1|8|G|68
8QFD|1|8|U|69
8QFD|1|8|G|70
8QFD|1|8|A|71
8QFD|1|8|A|72
8QFD|1|8|U|73
8QFD|1|8|U|74
8QFD|1|8|G|75
8QFD|1|8|C|76
8QFD|1|8|A|77
8QFD|1|8|G|78
8QFD|1|8|G|79
8QFD|1|8|C|83
8QFD|1|8|G|87
8QFD|1|8|A|88
8QFD|1|8|U|89
8QFD|1|8|C|90
Current chains
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- 60S ribosomal protein L26
- Chain h
- 60S ribosomal protein L35
- Chain j
- Ribosomal protein L37
- Chain l
- 60S ribosomal protein L39
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