HL_8QOI_075

3D structure

PDB id

8QOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

8QOI|1|L5|C|5023

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QOI|1|L5|C|5021
8QOI|1|L5|U|5022
8QOI|1|L5|C|5023
8QOI|1|L5|C|5024
8QOI|1|L5|C|5025
8QOI|1|L5|U|5026
8QOI|1|L5|C|5027
8QOI|1|L5|G|5028

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LU

60S ribosomal protein L22

Chain SI

40S ribosomal protein S8