HL_8QOI_081

3D structure

PDB id

8QOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

GUUCCUC

Length

7 nucleotides

Bulged bases

8QOI|1|L8|C|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QOI|1|L8|G|122
8QOI|1|L8|U|123
8QOI|1|L8|U|124
8QOI|1|L8|C|125
8QOI|1|L8|C|126
8QOI|1|L8|U|127
8QOI|1|L8|C|128

Current chains

Chain L8

5.8S rRNA (156-MER)

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain LX

60S ribosomal protein L23a