HL_8QPP_006

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

8QPP|1|A|G|274

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_006 not in the Motif Atlas

Geometric match to HL_8G9Z_001

Geometric discrepancy: 0.1282

The information below is about HL_8G9Z_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

8QPP|1|A|G|267
8QPP|1|A|G|268
8QPP|1|A|U|269
8QPP|1|A|A|270
8QPP|1|A|A|271
8QPP|1|A|C|272
8QPP|1|A|G|273
8QPP|1|A|G|274
8QPP|1|A|C|275

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain Q

30S ribosomal protein S17

Chain T

30S ribosomal protein S20