HL_8QPP_026

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUUCAGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_026 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.3635

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

8QPP|1|A|A|1143
8QPP|1|A|U|1144
8QPP|1|A|U|1145
8QPP|1|A|C|1146
8QPP|1|A|A|1147
8QPP|1|A|G|1148
8QPP|1|A|U|1149
8QPP|1|A|U|1150

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain I

30S ribosomal protein S9