HL_8QPP_034
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCUGUCACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QPP_034 not in the Motif Atlas
- Homologous match to HL_6UGG_005
- Geometric discrepancy: 0.1466
- The information below is about HL_6UGG_005
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
8QPP|1|U|C|31
8QPP|1|U|C|32
8QPP|1|U|U|33
8QPP|1|U|G|34
8QPP|1|U|U|35
8QPP|1|U|C|36
8QPP|1|U|A|37
8QPP|1|U|C|38
8QPP|1|U|G|39
Current chains
- Chain U
- tRNA (77-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain I
- 30S ribosomal protein S9
- Chain V
- mRNA (33-MER)
Coloring options: