HL_8QPP_038

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

8QPP|1|X|A|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_038 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.1233

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

8QPP|1|X|G|122
8QPP|1|X|G|123
8QPP|1|X|A|124
8QPP|1|X|A|125
8QPP|1|X|A|126
8QPP|1|X|C|127

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34

Chain s

Large ribosomal subunit protein uL23