HL_8QPP_050

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_050 not in the Motif Atlas

Homologous match to HL_7A0S_015

Geometric discrepancy: 0.1217

The information below is about HL_7A0S_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

8QPP|1|X|C|509
8QPP|1|X|G|510
8QPP|1|X|U|511
8QPP|1|X|G|512
8QPP|1|X|A|513
8QPP|1|X|G|514

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34

Chain b

Large ribosomal subunit protein uL4