HL_8QPP_061

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUACCG

Length

6 nucleotides

Bulged bases

8QPP|1|X|C|936

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_061 not in the Motif Atlas

Geometric match to HL_2Y8Y_001

Geometric discrepancy: 0.3535

The information below is about HL_2Y8Y_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

8QPP|1|X|C|933
8QPP|1|X|U|934
8QPP|1|X|A|935
8QPP|1|X|C|936
8QPP|1|X|C|937
8QPP|1|X|G|938

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain M

30S ribosomal protein S13