HL_8QPP_067

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_067 not in the Motif Atlas

Homologous match to HL_7A0S_031

Geometric discrepancy: 0.1192

The information below is about HL_7A0S_031

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

8QPP|1|X|C|1262
8QPP|1|X|G|1263
8QPP|1|X|G|1264
8QPP|1|X|A|1265
8QPP|1|X|A|1266
8QPP|1|X|G|1267

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain i

50S ribosomal protein L15

Chain n

Large ribosomal subunit protein bL20

Chain o

Large ribosomal subunit protein bL21