HL_8QPP_089

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

8QPP|1|X|G|2279

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_089 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.1174

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QPP|1|X|C|2277
8QPP|1|X|U|2278
8QPP|1|X|G|2279
8QPP|1|X|G|2280
8QPP|1|X|G|2281
8QPP|1|X|G|2282
8QPP|1|X|C|2283
8QPP|1|X|G|2284
8QPP|1|X|G|2285

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain U

Transfer RNA; tRNA

Chain j

Large ribosomal subunit protein uL16

Chain u

Large ribosomal subunit protein bL27