HL_8QPP_091

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_091 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.4207

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8QPP|1|X|G|2332
8QPP|1|X|G|2333
8QPP|1|X|U|2334
8QPP|1|X|U|2335
8QPP|1|X|G|2336
8QPP|1|X|G|2337
8QPP|1|X|A|2338
8QPP|1|X|A|2339
8QPP|1|X|A|2340
8QPP|1|X|U|2341
8QPP|1|X|C|2342

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain c

Large ribosomal subunit protein uL5