HL_8QPP_094

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_094 not in the Motif Atlas

Homologous match to HL_7A0S_057

Geometric discrepancy: 0.2012

The information below is about HL_7A0S_057

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

8QPP|1|X|C|2403
8QPP|1|X|G|2404
8QPP|1|X|A|2405
8QPP|1|X|A|2406
8QPP|1|X|A|2407
8QPP|1|X|G|2408

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL33

Chain l

50S ribosomal protein L18