HL_8QPP_095

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

8QPP|1|X|C|2435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_095 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.1009

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8QPP|1|X|C|2433
8QPP|1|X|G|2434
8QPP|1|X|C|2435
8QPP|1|X|A|2436
8QPP|1|X|U|2437
8QPP|1|X|G|2438
8QPP|1|X|G|2439
8QPP|1|X|A|2440
8QPP|1|X|A|2441
8QPP|1|X|G|2442

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain i

50S ribosomal protein L15