HL_8QPP_100

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QPP_100 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2399

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

8QPP|1|X|C|2687
8QPP|1|X|G|2688
8QPP|1|X|A|2689
8QPP|1|X|G|2690
8QPP|1|X|A|2691
8QPP|1|X|G|2692

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain d

Large ribosomal subunit protein uL6