3D structure

PDB id
8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AGCAUCACCAGUAUU
Length
15 nucleotides
Bulged bases
8QSJ|1|A|A|2521, 8QSJ|1|A|C|2523, 8QSJ|1|A|U|2531
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QSJ|1|A|A|2518
8QSJ|1|A|G|2519
8QSJ|1|A|C|2520
8QSJ|1|A|A|2521
8QSJ|1|A|U|2522
8QSJ|1|A|C|2523
8QSJ|1|A|A|2524
8QSJ|1|A|C|2525
8QSJ|1|A|C|2526
8QSJ|1|A|A|2527
8QSJ|1|A|G|2528
8QSJ|1|A|U|2529
8QSJ|1|A|A|2530
8QSJ|1|A|U|2531
8QSJ|1|A|U|2532

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain y
Transcription termination factor 4, mitochondrial

Coloring options:

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