3D structure

PDB id
8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GCAGAACCCAACC
Length
13 nucleotides
Bulged bases
8QSJ|1|A|G|2831, 8QSJ|1|A|A|2832
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QSJ|1|A|G|2828
8QSJ|1|A|C|2829
8QSJ|1|A|A|2830
8QSJ|1|A|G|2831
8QSJ|1|A|A|2832
8QSJ|1|A|A|2833
8QSJ|1|A|C|2834
8QSJ|1|A|C|2835
8QSJ|1|A|C|2836
8QSJ|1|A|A|2837
8QSJ|1|A|A|2838
8QSJ|1|A|C|2839
8QSJ|1|A|C|2840

Current chains

Chain A
16S rRNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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