HL_8QSJ_030

3D structure

PDB id

8QSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QSJ_030 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.1656

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8QSJ|1|A|A|2958
8QSJ|1|A|G|2959
8QSJ|1|A|U|2960
8QSJ|1|A|C|2961
8QSJ|1|A|C|2962
8QSJ|1|A|A|2963
8QSJ|1|A|U|2964
8QSJ|1|A|A|2965
8QSJ|1|A|U|2966

Current chains

Chain A

16S rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial