3D structure

PDB id
8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AAUGAUUCUCAACU
Length
14 nucleotides
Bulged bases
8QSJ|1|A|C|3189
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QSJ|1|A|A|3176
8QSJ|1|A|A|3177
8QSJ|1|A|U|3178
8QSJ|1|A|G|3179
8QSJ|1|A|A|3180
8QSJ|1|A|U|3181
8QSJ|1|A|U|3186
8QSJ|1|A|C|3187
8QSJ|1|A|U|3188
8QSJ|1|A|C|3189
8QSJ|1|A|A|3190
8QSJ|1|A|A|3191
8QSJ|1|A|C|3192
8QSJ|1|A|U|3193

Current chains

Chain A
16S rRNA

Nearby chains

Chain 4
39S ribosomal protein L36, mitochondrial
Chain K
39S ribosomal protein L13, mitochondrial
Chain r
39S ribosomal protein S18a, mitochondrial

Coloring options:

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