HL_8R09_002

3D structure

PDB id

8R09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GUAUUGCAGUACCUC

Length

15 nucleotides

Bulged bases

8R09|1|2|U|167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R09|1|2|G|158
8R09|1|2|U|159
8R09|1|2|A|160
8R09|1|2|U|161
8R09|1|2|U|162
8R09|1|2|G|163
8R09|1|2|C|164
8R09|1|2|A|165
8R09|1|2|G|166
8R09|1|2|U|167
8R09|1|2|A|168
8R09|1|2|C|169
8R09|1|2|C|170
8R09|1|2|U|171
8R09|1|2|C|172

Current chains

Chain 2

U2 snRNA

Nearby chains

Chain 23

Small nuclear ribonucleoprotein Sm D3

Chain 2B

U2 small nuclear ribonucleoprotein B''